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Silver in PDB 2rvp: Solution Structure of Dna Containing Metallo-Base-Pair

Silver Binding Sites:

The binding sites of Silver atom in the Solution Structure of Dna Containing Metallo-Base-Pair (pdb code 2rvp). This binding sites where shown within 5.0 Angstroms radius around Silver atom.
In total only one binding site of Silver was determined in the Solution Structure of Dna Containing Metallo-Base-Pair, PDB code: 2rvp:

Silver binding site 1 out of 1 in 2rvp

Go back to Silver Binding Sites List in 2rvp
Silver binding site 1 out of 1 in the Solution Structure of Dna Containing Metallo-Base-Pair


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 1 of Solution Structure of Dna Containing Metallo-Base-Pair within 5.0Å range:
probe atom residue distance (Å) B Occ
1:Ag101

b:0.0
occ:1.00
N3 2:DC23 2.2 0.0 1.0
N3 1:DC8 2.2 0.0 1.0
H42 2:DC23 2.3 0.0 1.0
H42 1:DC8 2.4 0.0 1.0
N4 2:DC23 3.0 0.0 1.0
C4 2:DC23 3.0 0.0 1.0
C4 1:DC8 3.0 0.0 1.0
N4 1:DC8 3.0 0.0 1.0
C2 1:DC8 3.2 0.0 1.0
C2 2:DC23 3.2 0.0 1.0
O2 1:DC8 3.3 0.0 1.0
O2 2:DC23 3.4 0.0 1.0
N1 1:DA7 3.6 0.0 1.0
N1 2:DA22 3.7 0.0 1.0
C6 1:DA7 3.8 0.0 1.0
H3 2:DT24 3.8 0.0 1.0
H3 1:DT9 3.9 0.0 1.0
H41 2:DC23 3.9 0.0 1.0
C6 2:DA22 4.0 0.0 1.0
C2 1:DA7 4.0 0.0 1.0
H41 1:DC8 4.0 0.0 1.0
N6 1:DA7 4.1 0.0 1.0
C2 2:DA22 4.1 0.0 1.0
H62 1:DA7 4.1 0.0 1.0
H62 2:DA22 4.2 0.0 1.0
N6 2:DA22 4.2 0.0 1.0
C5 1:DA7 4.3 0.0 1.0
H2 1:DA7 4.3 0.0 1.0
N3 2:DT24 4.4 0.0 1.0
C5 2:DC23 4.4 0.0 1.0
N3 1:DT9 4.4 0.0 1.0
C5 1:DC8 4.4 0.0 1.0
H2 2:DA22 4.4 0.0 1.0
N1 1:DC8 4.5 0.0 1.0
N1 2:DC23 4.5 0.0 1.0
N3 1:DA7 4.5 0.0 1.0
O4 1:DT9 4.5 0.0 1.0
O4 2:DT24 4.5 0.0 1.0
C5 2:DA22 4.6 0.0 1.0
C4 1:DA7 4.6 0.0 1.0
H61 1:DA7 4.6 0.0 1.0
C4 1:DT9 4.7 0.0 1.0
C4 2:DT24 4.7 0.0 1.0
N3 2:DA22 4.7 0.0 1.0
H61 2:DA22 4.8 0.0 1.0
C4 2:DA22 4.9 0.0 1.0
C6 2:DC23 4.9 0.0 1.0
C6 1:DC8 4.9 0.0 1.0

Reference:

T.Dairaku, K.Furuita, H.Sato, J.Sebera, K.Nakashima, J.Kondo, D.Yamanaka, Y.Kondo, I.Okamoto, A.Ono, V.Sychrovsky, C.Kojima, Y.Tanaka. Structure Determination of An Ag(I) -Mediated Cytosine-Cytosine Base Pair Within Dna Duplex in Solution with (1) H/(15) N/(109) Ag uc(Nmr) Spectroscopy. Chemistry V. 22 13028 2016.
ISSN: ISSN 1521-3765
PubMed: 27505707
DOI: 10.1002/CHEM.201603048
Page generated: Sun Jul 6 20:47:32 2025

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