Silver in PDB 6z99: Copper Transporter Oprc

The structure of Copper Transporter Oprc, PDB code: 6z99 was solved by S.P.Bhamidimarri, B.Van Den Berg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	84.18 / 2.68
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	154.644, 195.506, 165.629, 90, 90, 90
R / Rfree (%)	21.5 / 25.2

The binding sites of Silver atom in the Copper Transporter Oprc (pdb code 6z99). This binding sites where shown within 5.0 Angstroms radius around Silver atom.
In total 6 binding sites of Silver where determined in the Copper Transporter Oprc, PDB code: 6z99:
Jump to Silver binding site number: 1; 2; 3; 4; 5; 6;

Silver binding site 1 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 1 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ A:Ag801 b:91.2 occ:1.00 SD A:MET325 2.4 76.0 1.0 CE A:MET325 2.4 82.2 1.0 CE A:MET147 2.6 79.4 1.0 CG A:MET325 2.8 73.0 1.0 SD A:MET147 2.9 65.9 1.0 CG A:MET147 3.8 64.1 1.0 CB A:MET325 4.1 61.4 1.0 CB A:MET147 4.4 59.4 1.0 CB A:ALA143 4.5 56.9 1.0 NE2 A:HIS323 4.5 60.6 1.0 CD A:PRO144 4.8 58.2 1.0

Silver binding site 2 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 2 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ A:Ag802 b:137.0 occ:1.00 CE A:MET286 2.1 88.3 1.0 SD A:MET339 2.5 119.5 1.0 CG A:MET339 3.0 102.8 1.0 SD A:MET343 3.5 105.7 1.0 SD A:MET286 3.6 76.6 1.0 CE A:MET339 3.6 103.4 1.0 CG A:MET286 3.7 63.3 1.0 CB A:MET343 3.9 83.5 1.0 CG A:MET343 4.1 96.8 1.0 CB A:MET339 4.4 97.7 1.0 ND2 A:ASN327 4.9 73.0 1.0

Silver binding site 3 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 3 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ A:Ag803 b:142.3 occ:1.00 CE A:MET343 2.4 110.8 1.0 CE A:MET341 2.6 116.1 1.0 SD A:MET343 2.7 105.7 1.0 SD A:MET341 3.1 127.7 1.0 CG A:MET341 3.2 97.4 1.0 CG A:MET343 3.6 96.8 1.0 CB A:MET343 4.5 83.5 1.0 CB A:MET341 4.6 94.3 1.0 O A:MET341 5.0 85.8 1.0

Silver binding site 4 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 4 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ B:Ag801 b:96.9 occ:1.00 CE B:MET147 2.3 84.2 1.0 CE B:MET325 2.4 82.1 1.0 SD B:MET325 2.5 90.4 1.0 SD B:MET147 2.6 85.7 1.0 NE2 B:HIS323 3.4 67.0 1.0 CG B:MET325 3.4 74.5 1.0 CB B:MET325 3.5 72.4 1.0 CG B:MET147 4.0 70.2 1.0 CB B:ALA143 4.0 71.0 1.0 CD2 B:HIS323 4.2 70.4 1.0 CB B:MET147 4.3 66.2 1.0 CD B:PRO144 4.3 71.4 1.0 CE1 B:HIS323 4.4 67.9 1.0 CA B:ALA143 4.8 66.5 1.0 CA B:MET325 4.8 71.9 1.0

Silver binding site 5 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 5 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ B:Ag802 b:157.4 occ:1.00 CE B:MET339 2.2 100.8 1.0 SD B:MET339 2.3 105.1 1.0 CE B:MET286 2.5 110.1 1.0 CG B:MET339 3.3 102.9 1.0 SD B:MET343 3.3 104.5 1.0 SD B:MET286 3.5 91.9 1.0 CG B:MET343 3.9 82.8 1.0 CG B:MET286 3.9 77.9 1.0 CB B:MET343 4.3 75.8 1.0 CE B:MET343 4.6 95.4 1.0 CB B:MET339 4.6 97.5 1.0 CD2 B:HIS447 4.9 125.6 1.0

Silver binding site 6 out of 6 in the Copper Transporter Oprc


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 6 of Copper Transporter Oprc within 5.0Å range: probe atom residue distance (Å) B Occ B:Ag803 b:124.4 occ:1.00 CE B:MET343 2.1 95.4 1.0 SD B:MET341 2.4 120.6 1.0 CE B:MET341 2.9 120.8 1.0 SD B:MET343 3.5 104.5 1.0 CG B:MET341 3.7 100.5 1.0 CB B:MET341 4.2 93.8 1.0 CG B:MET343 4.7 82.8 1.0 CB B:MET343 4.8 75.8 1.0 CB B:MET448 4.9 127.7 1.0

S.P.Bhamidimarri, T.R.Young, M.Shanmugam, S.Soderholm, B.Belzunces, S.Khalid, A.Basle, D.Bumann, B.Van Den Berg. Acquisition of Ionic Copper By A Bacterial Outer Membrane Protein To Be Published.