Atomistry » Silver » PDB 1aoo-6ka0 » 2vb3
Atomistry »
  Silver »
    PDB 1aoo-6ka0 »
      2vb3 »

Silver in PDB 2vb3: Crystal Structure of Ag(I)Cusf

Protein crystallography data

The structure of Crystal Structure of Ag(I)Cusf, PDB code: 2vb3 was solved by Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.24 / 2.33
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.658, 44.229, 44.241, 90.00, 90.00, 90.00
R / Rfree (%) 24.1 / 26.4

Silver Binding Sites:

The binding sites of Silver atom in the Crystal Structure of Ag(I)Cusf (pdb code 2vb3). This binding sites where shown within 5.0 Angstroms radius around Silver atom.
In total only one binding site of Silver was determined in the Crystal Structure of Ag(I)Cusf, PDB code: 2vb3:

Silver binding site 1 out of 1 in 2vb3

Go back to Silver Binding Sites List in 2vb3
Silver binding site 1 out of 1 in the Crystal Structure of Ag(I)Cusf


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 1 of Crystal Structure of Ag(I)Cusf within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Ag1088

b:78.1
occ:1.00
NE2 X:HIS36 2.3 70.0 1.0
SD X:MET47 2.5 72.3 1.0
SD X:MET49 2.7 73.1 1.0
CE3 X:TRP44 3.0 64.1 1.0
CE1 X:HIS36 3.1 69.6 1.0
CZ3 X:TRP44 3.3 65.0 1.0
CG X:MET47 3.3 70.8 1.0
CB X:MET49 3.4 70.1 1.0
CD2 X:TRP44 3.4 64.6 1.0
CD2 X:HIS36 3.5 70.4 1.0
CG X:MET49 3.5 71.9 1.0
CE X:MET49 3.8 72.6 1.0
CH2 X:TRP44 3.9 64.0 1.0
CE2 X:TRP44 4.0 64.4 1.0
CG X:TRP44 4.1 64.8 1.0
CE X:MET47 4.2 70.4 1.0
ND1 X:HIS36 4.3 69.3 1.0
CZ2 X:TRP44 4.3 64.3 1.0
CB X:TRP44 4.5 65.7 1.0
CG X:HIS36 4.5 69.2 1.0
CZ X:PHE51 4.5 68.2 1.0
CB X:MET47 4.6 69.5 1.0
CA X:MET49 4.8 70.3 1.0
NE1 X:TRP44 4.9 64.7 1.0
CD1 X:TRP44 4.9 64.6 1.0

Reference:

Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran. Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf. Nat.Chem.Biol. V. 4 107 2008.
ISSN: ISSN 1552-4450
PubMed: 18157124
DOI: 10.1038/NCHEMBIO.2007.57
Page generated: Wed Jul 10 08:21:02 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy