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Silver in PDB 2vb3: Crystal Structure of Ag(I)Cusf

Protein crystallography data

The structure of Crystal Structure of Ag(I)Cusf, PDB code: 2vb3 was solved by Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.24 / 2.33
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 39.658, 44.229, 44.241, 90.00, 90.00, 90.00
R / Rfree (%) 24.1 / 26.4

Silver Binding Sites:

The binding sites of Silver atom in the Crystal Structure of Ag(I)Cusf (pdb code 2vb3). This binding sites where shown within 5.0 Angstroms radius around Silver atom.
In total only one binding site of Silver was determined in the Crystal Structure of Ag(I)Cusf, PDB code: 2vb3:

Silver binding site 1 out of 1 in 2vb3

Go back to Silver Binding Sites List in 2vb3
Silver binding site 1 out of 1 in the Crystal Structure of Ag(I)Cusf


Mono view


Stereo pair view

A full contact list of Silver with other atoms in the Ag binding site number 1 of Crystal Structure of Ag(I)Cusf within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Ag1088

b:78.1
occ:1.00
NE2 X:HIS36 2.3 70.0 1.0
SD X:MET47 2.5 72.3 1.0
SD X:MET49 2.7 73.1 1.0
CE3 X:TRP44 3.0 64.1 1.0
CE1 X:HIS36 3.1 69.6 1.0
CZ3 X:TRP44 3.3 65.0 1.0
CG X:MET47 3.3 70.8 1.0
CB X:MET49 3.4 70.1 1.0
CD2 X:TRP44 3.4 64.6 1.0
CD2 X:HIS36 3.5 70.4 1.0
CG X:MET49 3.5 71.9 1.0
CE X:MET49 3.8 72.6 1.0
CH2 X:TRP44 3.9 64.0 1.0
CE2 X:TRP44 4.0 64.4 1.0
CG X:TRP44 4.1 64.8 1.0
CE X:MET47 4.2 70.4 1.0
ND1 X:HIS36 4.3 69.3 1.0
CZ2 X:TRP44 4.3 64.3 1.0
CB X:TRP44 4.5 65.7 1.0
CG X:HIS36 4.5 69.2 1.0
CZ X:PHE51 4.5 68.2 1.0
CB X:MET47 4.6 69.5 1.0
CA X:MET49 4.8 70.3 1.0
NE1 X:TRP44 4.9 64.7 1.0
CD1 X:TRP44 4.9 64.6 1.0

Reference:

Y.Xue, A.V.Davis, G.Balakrishnan, J.P.Stasser, B.M.Staehlin, P.Focia, T.G.Spiro, J.E.Penner-Hahn, T.V.O'halloran. Cu(I) Recognition Via Cation-Pi and Methionine Interactions in Cusf. Nat.Chem.Biol. V. 4 107 2008.
ISSN: ISSN 1552-4450
PubMed: 18157124
DOI: 10.1038/NCHEMBIO.2007.57
Page generated: Tue Oct 27 16:40:16 2020
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