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    PDB 1aoo-3kso
      1aoo
      1aqq
      1q06
      2aw0
      2g7n
      2ke8
      2qcp
      2vb3
      2x17
      2x50
      3h94
      3kso

Silver in the structure of Crystal Structure Of the Ag(I) Form of E. Coli Cuer, A Copper Efflux Regulator (pdb 1q06)






The binding sites of Silver atom in the structure of Crystal Structure Of the Ag(I) Form of E. Coli Cuer, A Copper Efflux Regulator (pdb code 1q06). This binding sites where shown with 5.0 Angstroms radius around Silver atom.
The 1q06 structure was solved by A.CHANGELA, K.CHEN, Y.XUE, J.HOLSCHEN, C.E.OUTTEN, T.V.O'HALLORAN, A.MONDRAGON, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)24.1-2.1
Space groupP212121
a (A)59.516
b (A)66.583
c (A)81.821
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)21.9
Rfree (%)25.9


Silver Binding Sites:

Silver binding site 1 out of 2 in 1q06


Silver binding site 1 out of 2 in 1q06
Click to enlarge
stereopicture of Silver binding site 1 out of 2 in 1q06
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Silver in the PDB 1q06. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Silver atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Cys112, A: Pro113, A: Cys120, A: Pro121, A: Ile122, B: Ser77, B: Val80, B: Lys81,

conact list:


AtomAtomDistance (A)
AgCB A:Cys1123.30
AgSG A:Cys1122.54
AgCA A:Cys1124.42
AgCD A:Pro1134.87
AgO A:Cys1204.85
AgN A:Cys1204.78
AgCB A:Cys1203.28
AgSG A:Cys1202.43
AgC A:Cys1203.96
AgCA A:Cys1203.48
AgN A:Pro1213.93
AgCD A:Pro1213.69
AgCA A:Pro1214.98
AgN A:Ile1224.07
AgCB A:Ile1224.06
AgCD1 A:Ile1223.53
AgCG1 A:Ile1223.61
AgCA A:Ile1224.72
AgO B:Ser773.46
AgN B:Ser774.93
AgCB B:Ser773.87
AgOG B:Ser774.09
AgC B:Ser773.99
AgCA B:Ser773.68
AgCB B:Val804.38
AgCG1 B:Val804.60
AgN B:Lys814.64
AgCB B:Lys814.88

interactive model:


Silver binding site 2 out of 2 in 1q06


Silver binding site 2 out of 2 in 1q06
Click to enlarge
stereopicture of Silver binding site 2 out of 2 in 1q06
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Silver in the PDB 1q06. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Silver atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Ser77, A: Val80, A: Lys81, B: Cys112, B: Pro113, B: Asp119, B: Cys120, B: Pro121, B: Ile122,

conact list:


AtomAtomDistance (A)
AgO A:Ser773.57
AgCB A:Ser773.50
AgOG A:Ser774.58
AgC A:Ser774.09
AgCA A:Ser773.88
AgCB A:Val804.19
AgCG2 A:Val804.96
AgCG1 A:Val804.49
AgN A:Lys814.57
AgCB A:Lys814.91
AgCB B:Cys1123.37
AgSG B:Cys1122.35
AgC B:Cys1124.91
AgCA B:Cys1124.17
AgN B:Pro1134.88
AgCD B:Pro1134.36
AgO B:Asp1194.54
AgO B:Cys1204.89
AgN B:Cys1204.78
AgCB B:Cys1203.20
AgSG B:Cys1202.35
AgC B:Cys1204.05
AgCA B:Cys1203.51
AgN B:Pro1214.11
AgCD B:Pro1213.83
AgN B:Ile1224.21
AgCB B:Ile1224.17
AgCD1 B:Ile1223.77
AgCG1 B:Ile1223.81
AgCA B:Ile1224.83

interactive model:




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